PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00068.1.g00430.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 526aa    MW: 55277.4 Da    PI: 9.842
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00068.1.g00430.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like383.6e-123559125
                       G2-like  1 kprlrWtpeLHerFveaveqLGGse 25
                                  kprlrWt eLH+rFv+av+qLGG++
  Zjn_sc00068.1.g00430.1.am.mk 35 KPRLRWTAELHDRFVDAVAQLGGPD 59
                                  79*********************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.4E-113263IPR009057Homeodomain-like
PfamPF143792.9E-2384129IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 526 aa     Download sequence    Send to blast
MFPSSSKKPS TASANDRPMC VQDDSGGLVL TTDPKPRLRW TAELHDRFVD AVAQLGGPDT  60
MEMQRNVASS SGAMARVMSD RSVNVNEALR IQMEVQRRLH GELEVQKHLQ MRVEAQGKYM  120
QSILEKAYQA LGSSECATWP TGYKSLGSQA AVLDIGGSSM GFSSLQDLHF YGGSSSYMDD  180
QHQLMLQLDQ RPTTMDHNFL TLGESGGSSV SKKGAMPAAS NHCSSTSNSS MMWAGGEEQQ  240
AKSAATGQLQ MGSIMSGDSI GSKAFEGSSS KLEMMSSPPS QQAPPAGNEG MSSPMVGAQA  300
RNMLLCHLLL ADTATASTGN GEARTTTAHP DGAAAAACPA GVTAATALDL AAARDLAAAA  360
AAVATPPAWT LVALETGVGG GLDVGGARDR RRGRVPGGGG GWRRRRQGRG GGPTTLGVSM  420
VTRCDALKIW TGGRVGVAAR RRLDRPARVQ DLTIHLKFAG TTDSSRSIDD GGDSAPPRVR  480
RGMRCPRWIW EVRAAGGSAA RRIRPPSPEK NFGIRGRLVD IAAAVI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1389405RRRGRVPGGGGGWRRRR
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9690503e-87EU969050.1 Zea mays clone 325800 myb family transcription factor-related protein mRNA, complete cds.
GenBankKJ7280543e-87KJ728054.1 Zea mays clone pUT6200 G2-like transcription factor (GLK34) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012700824.11e-120PREDICTED: myb family transcription factor APL-like
TrEMBLK3XY571e-120K3XY57_SETIT; Uncharacterized protein
STRINGSi006865m1e-119(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25043890
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79430.22e-41G2-like family protein